Publications

Major publications, books and reviews in the field of Proteincage Engineering

Publications

Category
Year of Publication

2023

Ravishankar S, Nedumaran AM, Gautam A, Ng KW, Czarny B, Lim S* (2023) Protein nanoparticle cellular fate and responses in murine macrophages. , NPG Asia Materials 15(1):1–16

Therapeutic/Delivery

Kumar A, Sharma B, Lim S (2023) Protein Cage Relaxivity Measurement for Magnetic Resonance Imaging Contrast Agents. , in Protein Cages: Design, Structure, and Applications, 349-360

Bioimaging

Sarker M, Watts S, Salentinig S, Lim S (2023) Protein Cage-Stabilized Emulsions: Formulation and Characterization. , in Protein Cages: Design, Structure, and Applications, 219-239

Emulsion

2022

Gupta NK, Okamoto N, Karuppannan SK, Pasula RR, Ziyu Z, Qi DC, Lim S, Nakamura M*, Nijhuis CA* (2022) The Role of Structural Order in the Mechanism of Charge Transport across Tunnel Junctions with Various Iron‐Storing Proteins. , Small 18(42):2203338

Electronics & Optics

Gupta NK, Karuppannan SK, Pasula RR, Vilan A*, Martin J, Xu W, May EM, Pike AR, Astier HPAG, Salim T, Lim S*, Nijhuis CA* (2022) Temperature-Dependent Coherent Tunneling across Graphene–Ferritin Biomolecular Junctions. , ACS Applied Materials & Interfaces 14 (39):44665-44675

Electronics & Optics

Kumar KS, Martin J, Xu W, Pasula RR, Lim S, Nijhuis CA* (2022) Biomolecular control over local gating in bilayer graphene induced by ferritin. , iScience 25(4):1041282022

Electronics & Optics

2021

Sun R, Lim S* (2021) Protein cages as building blocks for superstructures. , Engineering Biology

Design & Engineering

Bhaskar S, Thng S, Lim S* (2021) Engineered Protein Nanocages for Targeted and Enhanced Dermal Melanocyte Cellular Uptake. , Advanced NanoBiomed Research 1 (7), 2000115

Therapeutic/Delivery

Kumar A, Nandwana V, Ryoo SR, Ravishankar S, Sharma B, Pervushin K, Dravid VP, Lim S* (2021) Magnetoferritin enhances T2 contrast in magnetic resonance imaging of macrophages. , Materials Science and Engineering: C 128:112282

Bioimaging

Kaku TS, Lim S* (2021) Protein nanoparticles in molecular, cellular, and tissue imaging. Wiley Interdisciplinary Reviews (WIREs): Nanomedicine and Nanobiotechnology, e1714

Bioimaging

Sharma B, … Kumar A, … Lim S, Pervushin K* (2021) Lipocalin‐Type Prostaglandin d Synthase Conjugates as Magnetic Resonance Imaging Contrast Agents for Detecting Amyloid β‐Rich Regions in the Brain of Live. , Advanced NanoBiomed Research 1(11):2100019

Bioimaging

Lim S*, Salentinig S* (2021) Protein nanocage-stabilized Pickering emulsions. , Current Opinion in Colloid & Interface Science 56:101485

Emulsion

Kumar KS, Pasula RR,…, Lim S*, Nijhuis CA* (2021) Room-temperature tunnel magnetoresistance across biomolecular tunnel junctions based on ferritin. , Journal of Physics: Materials 4(3):035003

Electronics & Optics

Gupta NK, Pasula RR, Karuppannan SK,…, Lim S*, Nijhuis CA* (2021) Switching of the mechanism of charge transport induced by phase transitions in tunnel junctions with large biomolecular cages. Journal of Materials Chemistry C 9:10768

Electronics & Optics

2020

Ravishankar S, Suzuki S, Sawada T, Lim S*, Serizawa T* (2020) Preparation and Dynamic Behavior of Protein-Polymer Complexes Formed with Polymer-Binding Peptides. , Bulletin of the Chemical Society of Japan

Therapeutic/Delivery

Pasula RR, Kuniyil A, Lim S* (2020) Molecular Entrapment in Thermophilic Ferritin for Nanoformulation in Photodynamic Therapy. , Advanced Therapeutics, 1900172

Therapeutic/Delivery

Steinmetz. NF, Lim S, Sainsbury F* (2020) Protein cages and virus-like particles: from fundamental insight to biomimetic therapeutics. , Biomaterials Science 8 (10), 2771-2777

Therapeutic/Delivery

Nasrollahi F, Sana B, Paramelle D, Ahadian S, Khademhosseini A, Lim S* (2020) Incorporation of Graphene Quantum Dots, Iron, and Doxorubicin in/on Ferritin Nanocages for Bimodal Imaging and Drug Delivery. , Advanced Therapeutics, 190018

BioimagingTherapeutic/Delivery

Sarker M, Lee H, Gonçalves RA, Lam YM, Su H*, Lim S* (2020) Supramolecular Protein Assembly Retains Its Structural Integrity at Liquid–Liquid Interface. , Advanced Materials Interfaces, 1901674

Emulsion

S Mukhopadhyay, SK Karuppannan, …, Pasula RR, Lim S, Nijhuis CA, Vilan A, Cahen D* (2020) Solid-State Protein Junctions: Cross-Laboratory Study Shows Preservation of Mechanism at Varying Electronic Coupling. , iScience 23 (5), 101099

Electronics & Optics

Contreras-Llano LE, Meyer C, Liu Y, Sarker M, Lim S, Longo ML, Tan C* (2020) Holistic engineering of cell-free systems through proteome-reprogramming synthetic circuits. Nature Communications 11(1):1-10

Design & Engineering

2019

Ravishankar S, Lim S* (2019) Cyclodextrin conjugated ferritin nanocages reduce intracellular cholesterol level in foam cells. , Nano Research, 12(12):2925-2932

Therapeutic/Delivery

Renterghem LV, Guzzetta F, Le Griel P, Selmane M, Messaoud GB, Tan TST, Lim S, Soetaert W, Roelants S, Julián‐López B, Baccile N* (2019) Easy formation of functional liposomes in water using a pH‐responsive microbial glycolipid: Encapsulation of magnetic and upconverting nanoparticles. , ChemNanoMat 5(9):1188-1201

Therapeutic/Delivery

Nasrollahi F, Koh YR, Chen P, Varshosaz J, Khodadadi AA*, Lim S* (2019) Targeting graphene quantum dots to epidermal growth factor receptor for delivery of cisplatin and cellular imaging. , Materials Science and Engineering C, 94:247-257

Bioimaging

2018

Lee H*, Lim S (2018) Disassembly and trimer formation of E2 protein cage: the effects of C-terminus, salt, and protonation state. , Journal of Physics D: Applied Physics, 51(36):365402

Design & Engineering

2017

Pasula RR, Lim S* (2017) Engineering Nanoparticle Synthesis in Microbial Factories. , Engineering Biology, 1(1):12–17

Design & Engineering

Yu K, Yau YH, Sinha A, Tan T, Kickhoefer VA, Rome LH, Lee H, Shochat SG, Lim S* (2017) Modulation of the Vault Protein-Protein Interaction for Tuning of Molecular Release. , Scientific Reports, 7(1):14816

Design & Engineering

Bhaskar S, Lim S* (2017) Engineering Protein Nanocages as Carriers for Biomedical Applications. , NPG Asia Materials, 9(4):e371

Therapeutic/DeliveryBioimaging

Nandwana V, Ryoo SR, Kanthala S, Kumar A, Sharma A, Castro FC, Li Y, Hoffman B, Lim S, Dravid VP* (2017) Engineered Ferritin Nanocages as Natural Contrast Agents in Magnetic Resonance Imaging. , RSC Advances 7(55):34892-34900

Bioimaging

Sarker M, Tomczak N*, Lim S* (2017) Protein Nanocage as a pH-Switchable Pickering Emulsifier. , ACS Applied Materials and Interfaces, 9(12):11193–11201

Emulsion

2016

Paramelle D*, Peng T, Free P, Fernig DG, Lim S*, Tomczak N* (2016) Specific Internalisation of Gold Nanoparticles into Engineered Porous Protein Cages via Affinity Binding. , PLoS One 11(9):e0162848

Therapeutic/Delivery

Nasrollahi F, Varshosaz J*, Khodadadi AA*, Lim S, Jahanian-Najafabadi A (2016) Targeted Delivery of Docetaxel by Use of Transferrin/Poly(allylamine hydrochloride)-functionalized Graphene Oxide Nanocarrier. , ACS Applied Materials and Interfaces, 8 (21):13282–13293

Therapeutic/Delivery

Kumar KS, Pasula RR, Lim S, Nijhuis CA* (2016) Long-Range Tunneling Processes across Ferritin-Based Junctions. , Advanced Materials, 28(9):1824-1830. Back cover

Electronics & Optics

2015

Sana B, Johnson E, Lim S* (2015) The Unique Self-assembly/disassembly Property of Archaeoglobus fulgidus Ferritin and Its Implications on Molecular Release from the Protein Cage. , Biochimica et Biophysica Acta (BBA) - General Subjects, 1805(12):2544-2551

Design & Engineering

Peng T, Lee H, Lim S* (2015) Design of a Reversible Inversed pH-Responsive Caged-Like Protein. , Biomaterials Science, 3:627-635

Design & Engineering

Dewi HA, Sun G, Zheng L, Lim S* (2015) Interaction and Charge Transfer between Isolated Thylakoids and Multi-walled Carbon Nanotubes. , Physical Chemistry Chemical Physics, 17:3435-3440

Electronics & Optics

2014 and earlier

Peng T, Paramelle D, Sana B, Lee CF, Lim S* (2014) Designing Non-Native Iron-Binding Site on a Protein Cage for Biological Synthesis of Nanoparticles. , Small, 10(15):3131-3138

Design & Engineering

Sana B, Johnson E#, Le Magueres P, Criswell A, Cascio D*, Lim S* (2013) The Role of Non-conserved Residues of Archaeoglobus fulgidus Ferritin on Its Unique Structural and Biophysical Features. , Journal of Biological Chemistry, 288(45):32663-32672

Design & Engineering

Qiu H, Dong X#, Sana B, Peng T, Paramelle D, Chen P, and Lim S* (2013) Ferritin-templated synthesis and self-assembly of Pt nanoparticles on monolithic porous graphene network for electrocatalysis in fuel cell. , ACS Applied Materials and Interfaces, 5(3):782-787

Design & Engineering

Peng T, Lee H, Lim S* (2012) Isolating a Trimer Intermediate in the Self-assembly of E2 Protein Cage. , Biomacromolecules 13(3):699–705

Design & Engineering

Peng T, Lim S* (2011) Trimer-Based Design of pH-Responsive Protein Cage Results in Soluble Disassembled Structures. , Biomacromolecules 12(19):3131-3138

Design & Engineering

Dalmau M, Lim S, Wang S-W* (2009) pH-Triggered Disassembly in a Caged Protein Complex. , Biomacromolecules 10(12):3199–3206. Highlighted on Biopolymers 93(2): iii (Feb 2010)

Design & Engineering

Dalmau M, Lim S, Wang S-W* (2009) Design of a pH-Dependent Molecular Switch in a Caged Protein Platform. , Nano Letters 9(1):160-166

Design & Engineering

Dalmau M, Lim S#, Chen H, Ruiz C, Wang S-W* (2008) Thermostability and Molecular Encapsulation within an Engineered Caged Protein Scaffold. , Biotechnology and Bioengineering 101:654-664. Issue "Spotlight"; cover art for Dec 1, 2008 edition

Design & Engineering

Li Y, Toyip RO, Peng T, Lim S* (2012) Encapsulation and Release Profile of Protein Cage from a Polymeric Matrix. , Nano LIFE, 2(1):1250001. Invited

Therapeutic/Delivery

Bücheler J, Howard C#, de Bakker CJ, Goodall S, Jones ML, Win T, Peng T, Tan CH, Chopra A, Mahler S, Lim S* (2014) Development of a protein nanoparticle platform for targeting EGFR expressing cancer cells. , Journal of Chemical Technology & Biotechnology, 80(7):1230-1236. Invited

Bioimaging

Walsh EG*, Mills DR, Lim S, Sana B, Brilliant KE, Park WKC (2013) MRI contrast demonstration of antigen-specific targeting with an iron-based ferritin construct. , Journal of Nanoparticle Research 15:1409

Bioimaging

Sana B, Poh CL, Lim S* (2012) A Manganese-ferritin Nanocomposite as an Ultrasensitive T2 Contrast Agent. , Chemical Communications 48(6):862-864

Bioimaging

Sana B, Johnson E, Sheah K, Poh CL, Lim S* (2010) Iron-Based Ferritin Nanocore as a Contrast Agent. , Biointerphases 5(3):FA48-FA52. Ranked 4th on the journal's Top 20 Most Downloaded Articles in Feb 2011

Bioimaging

Sana B, Lim S* (2014) Determining the Relaxivity Values of Protein Cage-templated Nanoparticles using Magnetic Resonance Imaging. , in Protein Cages volume, Orner, B (Ed.), Methods in Molecular Biology. Invited

Bioimaging

Meng F, Sana B, Li Y, Liu Y, Lim S*, Chen X* (2014) Bioengineered Tuneable Memristor Based on Protein Nanocage. , Small 10(2):277-283. Highlighted on Nanowerk and Materials Views China

Electronics & Optics

Meng F, Jiang L, Zheng K, Goh CF, Lim S, Hng HH, Boey F, Chen X* (2011) Protein-Based Memristive Nanodevices. , Small 7(21):3016-3020

Electronics & Optics

Dewi HA, Meng F, Sana B, Guo C, Norling B, Chen X, Lim S* (2014) Investigation on Electron Transfer from Isolated Spinach Thylakoids to Indium Tin Oxide. , RSC Advances, 4(90):48815-48820

Electronics & Optics

Notable Reviews

Uchida M, Young M, Douglas T (2007) Biological Containers: Protein Cages as Multifunctional Nanoplatforms - Uchida - 2007 - Advanced Materials - Wiley Online Library 

Bhaskar SM, Lim S (2017) Engineering protein nanocages as carriers for biomedical applications | NPG Asia Materials 

Heedle JG, Chakraborti S, Iwasaki K (2017) Natural and artificial protein cages: design, structure and therapeutic applications - ScienceDirect

Aumiller WM, Uchida M, Douglas T (2018) Protein cage assembly across multiple length scales - Chemical Society Reviews (RSC Publishing)

Neek M, Kim TI, Wang S-W (2019) Protein-based nanoparticles in cancer vaccine development - ScienceDirect

Korpi A, Kostiainen M, et al. (2019) Protein-based nanoparticles in cancer vaccine development - ScienceDirect

Steinmetz N, Lim S, Sainsbury F (2020) Protein cages and virus-like particles: from fundamental insight to biomimetic therapeutics - Biomaterials Science (RSC Publishing) 

Berckman EA, Chen W, et al. (2020) Biological Assembly of Modular Protein Building Blocks as Sensing, Delivery, and Therapeutic Agents | Annual Reviews 

Kaku T, Lim S (2021) Protein nanoparticles in molecular, cellular, and tissue imaging - Kaku - 2021 - WIREs Nanomedicine and Nanobiotechnology - Wiley Online Library

Lim S, Salentinig S (2021) Protein nanocage-stabilized Pickering emulsions - ScienceDirect

Edwardson TGW, Hilvert D, et al. (2022) Protein Cages: From Fundamentals to Advanced Applications | Chemical Reviews 

Mallik BB, Khmelinskaia A, et al. (2023) De Novo Design of Polyhedral Protein Assemblies: Before and After the AI Revolution - Mallik - 2023 - ChemBioChem - Wiley Online Library

Books